[PATCH 0/4] gnu: Add cl-random-forest.

DoneSubmitted by Guillaume Le Vaillant.
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2 participants
  • Guillaume Le Vaillant
  • Pierre Neidhardt
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Guillaume Le Vaillant wrote on 3 Oct 2019 14:06
(address . guix-patches@gnu.org)
874l0qrq2z.fsf@yamatai
This patch series adds the cl-random-forest Common Lisp machine learninglibrary.
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Guillaume Le Vaillant wrote on 3 Oct 2019 14:11
[PATCH 1/4] gnu: Add cl-store.
(address . 37597@debbugs.gnu.org)(name . Guillaume Le Vaillant)(address . glv@posteo.net)
20191003121131.20803-1-glv@posteo.net
* gnu/packages/lisp.scm (sbcl-cl-store, cl-store, ecl-cl-store): New variables.--- gnu/packages/lisp.scm | 32 ++++++++++++++++++++++++++++++++ 1 file changed, 32 insertions(+)
Toggle diff (42 lines)diff --git a/gnu/packages/lisp.scm b/gnu/packages/lisp.scmindex ba009bb7a6..17d037c264 100644--- a/gnu/packages/lisp.scm+++ b/gnu/packages/lisp.scm@@ -7360,3 +7360,35 @@ compression/decompression using bindings to the lzlib C library.") (define-public ecl-lzlib (sbcl-package->ecl-package sbcl-lzlib))++(define-public sbcl-cl-store+ (let ((commit "cd01f2610d3360dc01ab972bd9317407aaea7745")+ (revision "0"))+ (package+ (name "sbcl-cl-store")+ (version (git-version "0.8.11" revision commit))+ (source+ (origin+ (method git-fetch)+ (uri (git-reference+ (url "https://github.com/skypher/cl-store.git")+ (commit commit)))+ (file-name (git-file-name name version))+ (sha256+ (base32+ "05b7kh5af2ax7vlmphpac4vbqr84j5ivppj96qzb64fxpjpqglm4"))))+ (build-system asdf-build-system/sbcl)+ (native-inputs+ `(("rt" ,sbcl-rt)))+ (synopsis "Common Lisp library to serialize data")+ (description+ "CL-STORE is a portable serialization package which should give you the+ability to store all Common Lisp data types into streams.")+ (home-page "http://www.common-lisp.net/project/cl-store/")+ (license license:expat))))++(define-public cl-store+ (sbcl-package->cl-source-package sbcl-cl-store))++(define-public ecl-cl-store+ (sbcl-package->ecl-package sbcl-cl-store))-- 2.23.0
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Guillaume Le Vaillant wrote on 3 Oct 2019 14:11
[PATCH 3/4] gnu: Add cl-online-learning.
(address . 37597@debbugs.gnu.org)(name . Guillaume Le Vaillant)(address . glv@posteo.net)
20191003121131.20803-3-glv@posteo.net
* gnu/packages/machine-learning.scm (sbcl-cl-online-learning, cl-online-learning, ecl-cl-online-learning): New variables.--- gnu/packages/machine-learning.scm | 39 +++++++++++++++++++++++++++++++ 1 file changed, 39 insertions(+)
Toggle diff (49 lines)diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scmindex a5b86b8010..2b46148095 100644--- a/gnu/packages/machine-learning.scm+++ b/gnu/packages/machine-learning.scm@@ -1956,3 +1956,42 @@ format.") (define-public ecl-cl-libsvm-format (sbcl-package->ecl-package sbcl-cl-libsvm-format))++(define-public sbcl-cl-online-learning+ (let ((commit "fc7a34f4f161cd1c7dd747d2ed8f698947781423")+ (revision "0"))+ (package+ (name "sbcl-cl-online-learning")+ (version (git-version "0.5" revision commit))+ (source+ (origin+ (method git-fetch)+ (uri (git-reference+ (url "https://github.com/masatoi/cl-online-learning.git")+ (commit commit)))+ (file-name (git-file-name name version))+ (sha256+ (base32+ "14x95rlg80ay5hv645ki57pqvy12v28hz4k1w0f6bsfi2rmpxchq"))))+ (build-system asdf-build-system/sbcl)+ (native-inputs+ `(("prove" ,sbcl-prove)+ ("prove-asdf" ,sbcl-prove-asdf)))+ (inputs+ `(("cl-libsvm-format" ,sbcl-cl-libsvm-format)+ ("cl-store" ,sbcl-cl-store)))+ (arguments+ `(;; FIXME: Tests pass but then the check phase crashes+ #:tests? #f))+ (synopsis "Online Machine Learning for Common Lisp")+ (description+ "This library contains a collection of machine learning algorithms for+online linear classification written in Common Lisp.")+ (home-page "https://github.com/masatoi/cl-online-learning")+ (license license:expat))))++(define-public cl-online-learning+ (sbcl-package->cl-source-package sbcl-cl-online-learning))++(define-public ecl-cl-online-learning+ (sbcl-package->ecl-package sbcl-cl-online-learning))-- 2.23.0
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Guillaume Le Vaillant wrote on 3 Oct 2019 14:11
[PATCH 2/4] gnu: Add cl-libsvm-format.
(address . 37597@debbugs.gnu.org)(name . Guillaume Le Vaillant)(address . glv@posteo.net)
20191003121131.20803-2-glv@posteo.net
* gnu/packages/machine-learning.scm (sbcl-cl-libsvm-format, cl-libsvm-format, ecl-cl-libsvm-format): New variables.--- gnu/packages/machine-learning.scm | 38 +++++++++++++++++++++++++++++++ 1 file changed, 38 insertions(+)
Toggle diff (69 lines)diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scmindex e48c91a2cf..a5b86b8010 100644--- a/gnu/packages/machine-learning.scm+++ b/gnu/packages/machine-learning.scm@@ -11,6 +11,7 @@ ;;; Copyright © 2018 Julien Lepiller <julien@lepiller.eu> ;;; Copyright © 2018 Björn Höfling <bjoern.hoefling@bjoernhoefling.de> ;;; Copyright © 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>+;;; Copyright © 2019 Guillaume Le Vaillant <glv@posteo.net> ;;; ;;; This file is part of GNU Guix. ;;;@@ -33,6 +34,7 @@ #:use-module (guix utils) #:use-module (guix download) #:use-module (guix svn-download)+ #:use-module (guix build-system asdf) #:use-module (guix build-system cmake) #:use-module (guix build-system gnu) #:use-module (guix build-system ocaml)@@ -58,6 +60,7 @@ #:use-module (gnu packages gstreamer) #:use-module (gnu packages image) #:use-module (gnu packages linux)+ #:use-module (gnu packages lisp) #:use-module (gnu packages maths) #:use-module (gnu packages mpi) #:use-module (gnu packages ocaml)@@ -1918,3 +1921,38 @@ that: @item Runs seamlessly on CPU and GPU. @end itemize\n") (license license:expat)))++(define-public sbcl-cl-libsvm-format+ (let ((commit "3300f84fd8d9f5beafc114f543f9d83417c742fb")+ (revision "0"))+ (package+ (name "sbcl-cl-libsvm-format")+ (version (git-version "0.1.0" revision commit))+ (source+ (origin+ (method git-fetch)+ (uri (git-reference+ (url "https://github.com/masatoi/cl-libsvm-format.git")+ (commit commit)))+ (file-name (git-file-name name version))+ (sha256+ (base32+ "0284aj84xszhkhlivaigf9qj855fxad3mzmv3zfr0qzb5k0nzwrg"))))+ (build-system asdf-build-system/sbcl)+ (native-inputs+ `(("prove" ,sbcl-prove)+ ("prove-asdf" ,sbcl-prove-asdf)))+ (inputs+ `(("alexandria" ,sbcl-alexandria)))+ (synopsis "LibSVM data format reader for Common Lisp")+ (description+ "This Common Lisp library provides a fast reader for data in LibSVM+format.")+ (home-page "https://github.com/masatoi/cl-libsvm-format")+ (license license:expat))))++(define-public cl-libsvm-format+ (sbcl-package->cl-source-package sbcl-cl-libsvm-format))++(define-public ecl-cl-libsvm-format+ (sbcl-package->ecl-package sbcl-cl-libsvm-format))-- 2.23.0
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Guillaume Le Vaillant wrote on 3 Oct 2019 14:11
[PATCH 4/4] gnu: Add cl-random-forest.
(address . 37597@debbugs.gnu.org)(name . Guillaume Le Vaillant)(address . glv@posteo.net)
20191003121131.20803-4-glv@posteo.net
* gnu/packages/machine-learning.scm (sbcl-cl-random-forest, cl-random-forest, ecl-cl-random-forest): New variables.--- gnu/packages/machine-learning.scm | 53 +++++++++++++++++++++++++++++++ 1 file changed, 53 insertions(+)
Toggle diff (63 lines)diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scmindex 2b46148095..0189e64467 100644--- a/gnu/packages/machine-learning.scm+++ b/gnu/packages/machine-learning.scm@@ -1995,3 +1995,56 @@ online linear classification written in Common Lisp.") (define-public ecl-cl-online-learning (sbcl-package->ecl-package sbcl-cl-online-learning))++(define-public sbcl-cl-random-forest+ (let ((commit "85fbdd4596d40e824f70f1b7cf239cf544e49d51")+ (revision "0"))+ (package+ (name "sbcl-cl-random-forest")+ (version (git-version "0.1" revision commit))+ (source+ (origin+ (method git-fetch)+ (uri (git-reference+ (url "https://github.com/masatoi/cl-random-forest.git")+ (commit commit)))+ (file-name (git-file-name name version))+ (sha256+ (base32+ "097xv60i1ndz68sg9p4pc7c5gvyp9i1xgw966b4wwfq3x6hbz421"))))+ (build-system asdf-build-system/sbcl)+ (native-inputs+ `(("prove" ,sbcl-prove)+ ("prove-asdf" ,sbcl-prove-asdf)+ ("trivial-garbage" ,sbcl-trivial-garbage)))+ (inputs+ `(("alexandria" ,sbcl-alexandria)+ ("cl-libsvm-format" ,sbcl-cl-libsvm-format)+ ("cl-online-learning" ,sbcl-cl-online-learning)+ ("lparallel" ,sbcl-lparallel)))+ (arguments+ `(;; The tests download data from the Internet+ #:tests? #f+ #:phases+ (modify-phases %standard-phases+ (add-after 'unpack 'add-sb-cltl2-dependency+ (lambda _+ ;; sb-cltl2 is required by lparallel when using sbcl, but it is+ ;; not loaded automatically.+ (substitute* "cl-random-forest.asd"+ (("\\(in-package :cl-user\\)")+ "(in-package :cl-user) #+sbcl (require :sb-cltl2)"))+ #t)))))+ (synopsis "Random Forest and Global Refinement for Common Lisp")+ (description+ "Cl-random-forest is an implementation of Random Forest for multiclass+classification and univariate regression written in Common Lisp. It also+includes an implementation of Global Refinement of Random Forest.")+ (home-page "https://github.com/masatoi/cl-random-forest")+ (license license:expat))))++(define-public cl-random-forest+ (sbcl-package->cl-source-package sbcl-cl-random-forest))++(define-public ecl-cl-random-forest+ (sbcl-package->ecl-package sbcl-cl-random-forest))-- 2.23.0
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Pierre Neidhardt wrote on 6 Oct 2019 14:39
Re: [bug#37597] [PATCH 0/4] gnu: Add cl-random-forest.
(name . Guillaume Le Vaillant)(address . glv@posteo.net)(address . 37597@debbugs.gnu.org)
877e5igia4.fsf@ambrevar.xyz
Merged. Thanks!
Tiny edit: I've capitalized "CL" in the description of sbcl-cl-random-forest.
Cheers!
-- Pierre Neidhardthttps://ambrevar.xyz/
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Pierre Neidhardt wrote on 6 Oct 2019 14:39
control message for bug #37597
(address . control@debbugs.gnu.org)
874l0mgi9r.fsf@ambrevar.xyz
close 37597 quit
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